STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HA50_20385Response regulator in two-component regulatory system with QseC; regulates FlhCD which is the master regulator for flagella and motility genes; Derived by automated computational analysis using gene prediction method: Protein Homology. (220 aa)    
Predicted Functional Partners:
HA50_20390
Two-component system sensor histidine kinase QseC; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.998
HA50_02360
Aerobic respiration two-component sensor histidine kinase ArcB; Derived by automated computational analysis using gene prediction method: Protein Homology.
0.990
HA50_15405
Two-component sensor histidine kinase BarA; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.986
HA50_05745
Sensor histidine kinase BvgS; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.979
HA50_24915
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.923
HA50_01545
Two-component sensor histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.917
HA50_02560
Two-component system sensor histidine kinase BasS; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.894
HA50_13575
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.889
HA50_29615
Two-component system sensor histidine kinase BasS; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.881
HA50_24930
Two-component sensor histidine kinase; Member of a two-component regulatory system.
 0.879
Your Current Organism:
Pantoea cypripedii
NCBI taxonomy Id: 55209
Other names: ATCC 29267, Bacillus cypripedii, CFBP 3613, CIP 105195, DSM 3873, Erwinia carotovora var. cypripedii, Erwinia cypripedii, Erwinia cyrpipedii, LMG 2655, LMG 2657, LMG:2655, LMG:2657, NCPPB 3004, P. cypripedii, Pectobacterium cypripedii
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