Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
HA50_21670Peptide ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (245 aa)    
Predicted Functional Partners:
HA50_21665
Amino acid ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  0.943
HA50_21660
ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  0.932
HA50_04775
Multidrug ABC transporter permease/ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    
0.841
HA50_21655
Amino acid ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
  0.782
HA50_25090
Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  0.769
HA50_06580
Cysteine/glutathione ABC transporter permease/ATP-binding protein CydD; In Escherichia coli the CydCD ABC transporter exports cysteine and glutathione into the periplasm in order to maintain redox balance; important for cytochrome bd and c; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    
0.766
HA50_30185
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  0.764
HA50_23310
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  0.761
HA50_23315
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  0.752
HA50_25085
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  0.749
Your Current Organism:
Pantoea cypripedii
NCBI taxonomy Id: 55209
Other names: ATCC 29267, Bacillus cypripedii, CFBP 3613, CIP 105195, DSM 3873, Erwinia carotovora var. cypripedii, Erwinia cypripedii, Erwinia cyrpipedii, LMG 2655, LMG 2657, LMG:2655, LMG:2657, NCPPB 3004, P. cypripedii, Pectobacterium cypripedii
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