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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
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Gene Fusion
Cooccurrence
Coexpression
Experiments
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[Homology]
Score
HA50_22145Putative nitrogen fixation protein NifT; Derived by automated computational analysis using gene prediction method: Protein Homology. (72 aa)    
Predicted Functional Partners:
HA50_22140
Nitrogen fixation protein NifY; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.952
HA50_22150
Nitrogenase molybdenum-iron protein subunit beta; This molybdenum-iron protein is part of the nitrogenase complex that catalyzes the key enzymatic reactions in nitrogen fixation; Belongs to the NifD/NifK/NifE/NifN family.
 
  
 0.896
HA50_22125
Nitrogen fixation protein NifX; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.892
HA50_22100
Nitrogen fixation protein NifZ; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.879
HA50_22130
Nitrogenase iron-molybdenum cofactor biosynthesis protein NifN; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the NifD/NifK/NifE/NifN family.
 
  
 0.830
HA50_22135
Nitrogenase iron-molybdenum cofactor biosynthesis protein NifE; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the NifD/NifK/NifE/NifN family.
 
  
 0.826
HA50_22025
Nitrogen fixation protein NifQ; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.791
HA50_22155
Nitrogenase molybdenum-iron protein alpha chain; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.789
nifH-2
Nitrogenase iron protein; The key enzymatic reactions in nitrogen fixation are catalyzed by the nitrogenase complex, which has 2 components: the iron protein and the molybdenum-iron protein; Belongs to the NifH/BchL/ChlL family.
 
  
 0.725
HA50_22040
Nitrogen fixation negative regulator NifL; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.690
Your Current Organism:
Pantoea cypripedii
NCBI taxonomy Id: 55209
Other names: ATCC 29267, Bacillus cypripedii, CFBP 3613, CIP 105195, DSM 3873, Erwinia carotovora var. cypripedii, Erwinia cypripedii, Erwinia cyrpipedii, LMG 2655, LMG 2657, LMG:2655, LMG:2657, NCPPB 3004, P. cypripedii, Pectobacterium cypripedii
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