STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HA50_23250Monooxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (445 aa)    
Predicted Functional Partners:
HA50_06785
NAD(P)H-dependent FMN reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.909
HA50_23240
Monooxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    
0.809
HA50_23270
Peptide ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.787
HA50_28340
SfnB family sulfur acquisition oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
  0.780
HA50_23245
Amidohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase M20A family.
       0.773
HA50_23255
ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.
       0.768
HA50_23260
Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.768
HA50_23265
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.768
HA50_28335
SfnB family sulfur acquisition oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
  0.749
HA50_24450
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.718
Your Current Organism:
Pantoea cypripedii
NCBI taxonomy Id: 55209
Other names: ATCC 29267, Bacillus cypripedii, CFBP 3613, CIP 105195, DSM 3873, Erwinia carotovora var. cypripedii, Erwinia cypripedii, Erwinia cyrpipedii, LMG 2655, LMG 2657, LMG:2655, LMG:2657, NCPPB 3004, P. cypripedii, Pectobacterium cypripedii
Server load: low (36%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.