STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HA50_23680FAD-dependent oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (421 aa)    
Predicted Functional Partners:
HA50_23685
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.940
HA50_23705
Aliphatic nitrilase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
  0.940
HA50_23695
Histone acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.938
HA50_23700
Radical SAM protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.938
HA50_23690
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.937
HA50_23710
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.933
HA50_23675
propionyl-CoA synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.819
HA50_24520
Calcium-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
   0.791
fadH
NADPH-dependent 2,4-dienoyl-CoA reductase; Catalyzes the formation of trans-2- enoyl-CoA from 2,4-dienoyl-CoA; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.713
HA50_24450
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.713
Your Current Organism:
Pantoea cypripedii
NCBI taxonomy Id: 55209
Other names: ATCC 29267, Bacillus cypripedii, CFBP 3613, CIP 105195, DSM 3873, Erwinia carotovora var. cypripedii, Erwinia cypripedii, Erwinia cyrpipedii, LMG 2655, LMG 2657, LMG:2655, LMG:2657, NCPPB 3004, P. cypripedii, Pectobacterium cypripedii
Server load: low (34%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.