STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001293595_00024Unannotated protein. (633 aa)    
Predicted Functional Partners:
GCA_001293595_03957
Unannotated protein.
 
  
 0.932
GCA_001293595_04644
Unannotated protein.
 
  
 0.888
GCA_001293595_03956
Unannotated protein.
 
  
 0.841
GCA_001293595_03391
Unannotated protein.
 
 
 0.836
GCA_001293595_00226
Unannotated protein.
   
 
  0.811
GCA_001293595_01337
Unannotated protein.
   
 
  0.811
GCA_001293595_03395
Unannotated protein.
 
  
 0.729
GCA_001293595_00219
Unannotated protein.
    
  0.727
GCA_001293595_02080
Unannotated protein.
    
  0.727
GCA_001293595_00023
Unannotated protein.
       0.713
Your Current Organism:
Streptomyces sp. TPA0875
NCBI taxonomy Id: 552354
Other names: S. sp. TP-A0875, Streptomyces sp. TP-A0875
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.