STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001293595_01118Unannotated protein. (375 aa)    
Predicted Functional Partners:
GCA_001293595_01117
Unannotated protein.
 
     0.857
GCA_001293595_00201
Unannotated protein.
    
  0.718
GCA_001293595_00462
Unannotated protein.
    
  0.718
GCA_001293595_05450
Unannotated protein.
  
 0.674
GCA_001293595_01119
Unannotated protein.
 
     0.619
GCA_001293595_03603
Unannotated protein.
   
 
 0.537
GCA_001293595_05932
Unannotated protein.
   
 
 0.537
GCA_001293595_05925
Unannotated protein.
   
 
 0.507
GCA_001293595_00163
Unannotated protein.
    
 
 0.497
GCA_001293595_02196
Unannotated protein.
   
   0.496
Your Current Organism:
Streptomyces sp. TPA0875
NCBI taxonomy Id: 552354
Other names: S. sp. TP-A0875, Streptomyces sp. TP-A0875
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.