STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001293595_01697Unannotated protein. (1175 aa)    
Predicted Functional Partners:
GCA_001293595_01695
Unannotated protein.
 
  
 0.998
GCA_001293595_01696
Unannotated protein.
 
  
 0.998
GCA_001293595_04148
Unannotated protein.
 
 
0.990
GCA_001293595_04817
Unannotated protein.
 
  
 0.980
GCA_001293595_04816
Unannotated protein.
 
  
 0.973
GCA_001293595_02662
Unannotated protein.
     
 0.972
GCA_001293595_00470
Unannotated protein.
  
 
 0.969
GCA_001293595_01364
Unannotated protein.
     
 0.963
GCA_001293595_01868
Unannotated protein.
     
0.954
GCA_001293595_03157
Unannotated protein.
   
 
  0.954
Your Current Organism:
Streptomyces sp. TPA0875
NCBI taxonomy Id: 552354
Other names: S. sp. TP-A0875, Streptomyces sp. TP-A0875
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.