STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001293595_01897Unannotated protein. (412 aa)    
Predicted Functional Partners:
GCA_001293595_03966
Unannotated protein.
  
 0.976
GCA_001293595_01861
Unannotated protein.
 
  
  0.900
GCA_001293595_05685
Unannotated protein.
    
 0.883
GCA_001293595_01898
Unannotated protein.
       0.824
GCA_001293595_03751
Unannotated protein.
  
     0.774
GCA_001293595_02509
Unannotated protein.
  
     0.769
GCA_001293595_01899
Unannotated protein.
       0.747
GCA_001293595_05391
Unannotated protein.
 
  
 0.741
GCA_001293595_01983
Unannotated protein.
    
 0.710
GCA_001293595_03559
Unannotated protein.
 
  
 
0.703
Your Current Organism:
Streptomyces sp. TPA0875
NCBI taxonomy Id: 552354
Other names: S. sp. TP-A0875, Streptomyces sp. TP-A0875
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.