STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001293595_04443Unannotated protein. (347 aa)    
Predicted Functional Partners:
GCA_001293595_04444
Unannotated protein.
 
    0.959
GCA_001293595_03607
Unannotated protein.
 
    0.792
GCA_001293595_03609
Unannotated protein.
 
     0.775
GCA_001293595_03610
Unannotated protein.
 
     0.775
GCA_001293595_03611
Unannotated protein.
 
     0.762
GCA_001293595_05149
Unannotated protein.
      
 0.605
GCA_001293595_03608
Unannotated protein.
 
     0.587
GCA_001293595_00567
Unannotated protein.
   
    0.540
Your Current Organism:
Streptomyces sp. TPA0875
NCBI taxonomy Id: 552354
Other names: S. sp. TP-A0875, Streptomyces sp. TP-A0875
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.