STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGJ47409.1Hypothetical protein. (183 aa)    
Predicted Functional Partners:
EGJ47410.1
Flavodoxin.
 
     0.925
EGJ47308.1
Pyruvate:ferredoxin (flavodoxin) oxidoreductase.
  
 
 0.898
EGJ48154.2
Aldehyde dehydrogenase (NAD+); Belongs to the aldehyde dehydrogenase family.
  
 
 0.697
EGJ45443.2
Phosphoribosylformylglycinamidine synthase.
 
    0.635
EGJ45698.1
Glyceraldehyde-3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.
  
  
 0.538
EGJ47408.1
Hypothetical protein.
       0.497
EGJ47451.1
Ferrous iron transporter A.
 
    0.459
eno
Enolase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family.
  
 
 0.425
EQN60563.1
Oxaloacetate decarboxylase, alpha subunit.
    
 0.423
EGJ46209.1
Glycerol-3-phosphate dehydrogenase.
    
 0.422
Your Current Organism:
Ruminococcaceae bacterium D16
NCBI taxonomy Id: 552398
Other names: R. bacterium D16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.