STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGJ48056.1Hypothetical protein. (287 aa)    
Predicted Functional Partners:
EGJ47308.1
Pyruvate:ferredoxin (flavodoxin) oxidoreductase.
    
  0.836
EGJ45988.1
Acetolactate synthase, large subunit, biosynthetic type.
  
 
 0.834
EGJ45990.1
Acetolactate synthase, large subunit, biosynthetic type.
  
 
 0.834
EGJ47302.1
Pyruvate, phosphate dikinase; Belongs to the PEP-utilizing enzyme family.
   
 
 0.831
EGJ47637.1
Malate dehydrogenase (oxaloacetate-decarboxylating).
    
 0.817
EGJ48084.1
Malate dehydrogenase (oxaloacetate-decarboxylating).
    
 0.817
EGJ46177.1
Hypothetical protein.
 
 
 0.695
EGJ48058.2
Nitrilase.
 
 
  0.677
EGJ47478.1
Aconitate hydratase 1.
  
 0.665
EGJ48055.1
Hypothetical protein.
  
    0.611
Your Current Organism:
Ruminococcaceae bacterium D16
NCBI taxonomy Id: 552398
Other names: R. bacterium D16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.