Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EGJ45450.2 | EGJ46366.1 | HMPREF0866_03068 | HMPREF0866_01385 | Hypothetical protein. | Hypothetical protein. | 0.451 |
EGJ45450.2 | EGJ46367.1 | HMPREF0866_03068 | HMPREF0866_01386 | Hypothetical protein. | ATP-binding cassette, subfamily B, bacterial. | 0.451 |
EGJ45450.2 | dnaK | HMPREF0866_03068 | HMPREF0866_00416 | Hypothetical protein. | Chaperone DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family. | 0.411 |
EGJ45450.2 | dnaK-2 | HMPREF0866_03068 | HMPREF0866_01485 | Hypothetical protein. | Chaperone dnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family. | 0.411 |
EGJ45900.2 | EGJ46366.1 | HMPREF0866_02677 | HMPREF0866_01385 | ABC transporter ATP-binding protein. | Hypothetical protein. | 0.876 |
EGJ45900.2 | EGJ46367.1 | HMPREF0866_02677 | HMPREF0866_01386 | ABC transporter ATP-binding protein. | ATP-binding cassette, subfamily B, bacterial. | 0.428 |
EGJ46365.1 | EGJ46366.1 | HMPREF0866_01384 | HMPREF0866_01385 | Hypothetical protein. | Hypothetical protein. | 0.706 |
EGJ46365.1 | EGJ46367.1 | HMPREF0866_01384 | HMPREF0866_01386 | Hypothetical protein. | ATP-binding cassette, subfamily B, bacterial. | 0.668 |
EGJ46366.1 | EGJ45450.2 | HMPREF0866_01385 | HMPREF0866_03068 | Hypothetical protein. | Hypothetical protein. | 0.451 |
EGJ46366.1 | EGJ45900.2 | HMPREF0866_01385 | HMPREF0866_02677 | Hypothetical protein. | ABC transporter ATP-binding protein. | 0.876 |
EGJ46366.1 | EGJ46365.1 | HMPREF0866_01385 | HMPREF0866_01384 | Hypothetical protein. | Hypothetical protein. | 0.706 |
EGJ46366.1 | EGJ46367.1 | HMPREF0866_01385 | HMPREF0866_01386 | Hypothetical protein. | ATP-binding cassette, subfamily B, bacterial. | 0.824 |
EGJ46366.1 | EGJ47248.1 | HMPREF0866_01385 | HMPREF0866_00187 | Hypothetical protein. | Hypothetical protein. | 0.570 |
EGJ46366.1 | dnaK | HMPREF0866_01385 | HMPREF0866_00416 | Hypothetical protein. | Chaperone DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family. | 0.444 |
EGJ46366.1 | dnaK-2 | HMPREF0866_01385 | HMPREF0866_01485 | Hypothetical protein. | Chaperone dnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family. | 0.434 |
EGJ46366.1 | potA | HMPREF0866_01385 | HMPREF0866_00146 | Hypothetical protein. | Spermidine/putrescine transport system ATP-binding protein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Spermidine/putrescine importer (TC 3.A.1.11.1) family. | 0.641 |
EGJ46367.1 | EGJ45450.2 | HMPREF0866_01386 | HMPREF0866_03068 | ATP-binding cassette, subfamily B, bacterial. | Hypothetical protein. | 0.451 |
EGJ46367.1 | EGJ45900.2 | HMPREF0866_01386 | HMPREF0866_02677 | ATP-binding cassette, subfamily B, bacterial. | ABC transporter ATP-binding protein. | 0.428 |
EGJ46367.1 | EGJ46365.1 | HMPREF0866_01386 | HMPREF0866_01384 | ATP-binding cassette, subfamily B, bacterial. | Hypothetical protein. | 0.668 |
EGJ46367.1 | EGJ46366.1 | HMPREF0866_01386 | HMPREF0866_01385 | ATP-binding cassette, subfamily B, bacterial. | Hypothetical protein. | 0.824 |
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