STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGJ46667.1Branched-chain amino acid transport system permease; Belongs to the binding-protein-dependent transport system permease family. (306 aa)    
Predicted Functional Partners:
EGJ46668.2
Branched-chain amino acid transport system permease; Belongs to the binding-protein-dependent transport system permease family.
 
 0.999
EGJ46157.1
Branched-chain amino acid transport system ATP-binding protein; Overlaps another CDS with the same product name.
 
 0.983
EGJ46156.1
Branched-chain amino acid transport system permease; Belongs to the binding-protein-dependent transport system permease family.
 
 0.976
EGJ46158.1
Branched-chain amino acid transport system ATP-binding protein; Overlaps another CDS with the same product name.
 
 0.975
EGJ46666.1
Branched-chain amino acid transport system substrate-binding protein.
 
 
 0.973
EQN61051.1
Branched-chain amino acid transport system substrate-binding protein.
 
 
 0.950
Your Current Organism:
Ruminococcaceae bacterium D16
NCBI taxonomy Id: 552398
Other names: R. bacterium D16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.