STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGJ46712.1Hypothetical protein. (123 aa)    
Predicted Functional Partners:
EGJ46711.1
Hypothetical protein.
 
 
  0.964
EGJ46654.1
Hypothetical protein.
 
 
  0.831
EGJ45952.1
Hypothetical protein.
 
 
  0.831
EGJ48063.2
Hypothetical protein.
 
 
  0.827
EGJ48064.2
Hypothetical protein.
 
 
  0.827
EGJ48226.2
Hypothetical protein.
 
 
  0.820
EGJ48229.2
Hypothetical protein.
 
 
  0.810
EGJ48227.2
Hypothetical protein.
 
 
  0.677
EGJ48357.1
Copper-translocating P-type ATPase.
  
  
 0.568
EGJ46713.1
Hypothetical protein.
       0.504
Your Current Organism:
Ruminococcaceae bacterium D16
NCBI taxonomy Id: 552398
Other names: R. bacterium D16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.