Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EGJ45698.1 | EGJ46237.1 | HMPREF0866_02475 | HMPREF0866_02392 | Glyceraldehyde-3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. | Hypothetical protein. | 0.909 |
EGJ45698.1 | EGJ47308.1 | HMPREF0866_02475 | HMPREF0866_00248 | Glyceraldehyde-3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. | Pyruvate:ferredoxin (flavodoxin) oxidoreductase. | 0.711 |
EGJ45698.1 | EGJ48296.2 | HMPREF0866_02475 | HMPREF0866_01258 | Glyceraldehyde-3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. | Transketolase. | 0.818 |
EGJ45698.1 | EGJ48297.1 | HMPREF0866_02475 | HMPREF0866_01259 | Glyceraldehyde-3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. | Transketolase. | 0.828 |
EGJ45698.1 | pfp | HMPREF0866_02475 | HMPREF0866_00785 | Glyceraldehyde-3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. | 6-phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate, the first committing step of glycolysis. Uses inorganic phosphate (PPi) as phosphoryl donor instead of ATP like common ATP-dependent phosphofructokinases (ATP-PFKs), which renders the reaction reversible, and can thus function both in glycolysis and gluconeogenesis. Consistently, PPi-PFK can replace the enzymes of both the forward (ATP- PFK) and reverse (fructose-bisphosphatase (FBPase)) reactions. | 0.672 |
EGJ45698.1 | tpiA | HMPREF0866_02475 | HMPREF0866_01716 | Glyceraldehyde-3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. | Triose-phosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family. | 0.999 |
EGJ46235.1 | EGJ46236.1 | HMPREF0866_02390 | HMPREF0866_02391 | Dihydroxyacetone kinase domain-containing protein. | Dihydroxyacetone kinase domain-containing protein. | 0.995 |
EGJ46235.1 | EGJ46237.1 | HMPREF0866_02390 | HMPREF0866_02392 | Dihydroxyacetone kinase domain-containing protein. | Hypothetical protein. | 0.831 |
EGJ46235.1 | EGJ46238.1 | HMPREF0866_02390 | HMPREF0866_02393 | Dihydroxyacetone kinase domain-containing protein. | Hypothetical protein. | 0.842 |
EGJ46235.1 | tpiA | HMPREF0866_02390 | HMPREF0866_01716 | Dihydroxyacetone kinase domain-containing protein. | Triose-phosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family. | 0.440 |
EGJ46236.1 | EGJ46235.1 | HMPREF0866_02391 | HMPREF0866_02390 | Dihydroxyacetone kinase domain-containing protein. | Dihydroxyacetone kinase domain-containing protein. | 0.995 |
EGJ46236.1 | EGJ46237.1 | HMPREF0866_02391 | HMPREF0866_02392 | Dihydroxyacetone kinase domain-containing protein. | Hypothetical protein. | 0.897 |
EGJ46236.1 | EGJ46238.1 | HMPREF0866_02391 | HMPREF0866_02393 | Dihydroxyacetone kinase domain-containing protein. | Hypothetical protein. | 0.885 |
EGJ46236.1 | tpiA | HMPREF0866_02391 | HMPREF0866_01716 | Dihydroxyacetone kinase domain-containing protein. | Triose-phosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family. | 0.835 |
EGJ46237.1 | EGJ45698.1 | HMPREF0866_02392 | HMPREF0866_02475 | Hypothetical protein. | Glyceraldehyde-3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. | 0.909 |
EGJ46237.1 | EGJ46235.1 | HMPREF0866_02392 | HMPREF0866_02390 | Hypothetical protein. | Dihydroxyacetone kinase domain-containing protein. | 0.831 |
EGJ46237.1 | EGJ46236.1 | HMPREF0866_02392 | HMPREF0866_02391 | Hypothetical protein. | Dihydroxyacetone kinase domain-containing protein. | 0.897 |
EGJ46237.1 | EGJ46238.1 | HMPREF0866_02392 | HMPREF0866_02393 | Hypothetical protein. | Hypothetical protein. | 0.894 |
EGJ46237.1 | EGJ47308.1 | HMPREF0866_02392 | HMPREF0866_00248 | Hypothetical protein. | Pyruvate:ferredoxin (flavodoxin) oxidoreductase. | 0.856 |
EGJ46237.1 | EGJ48296.2 | HMPREF0866_02392 | HMPREF0866_01258 | Hypothetical protein. | Transketolase. | 0.896 |
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