Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EGJ45789.2 | EGJ45790.1 | HMPREF0866_02566 | HMPREF0866_02567 | DNA polymerase III, delta' subunit. | Hypothetical protein. | 0.670 |
EGJ45789.2 | EGJ45791.2 | HMPREF0866_02566 | HMPREF0866_02568 | DNA polymerase III, delta' subunit. | Hypothetical protein. | 0.602 |
EGJ45790.1 | EGJ45789.2 | HMPREF0866_02567 | HMPREF0866_02566 | Hypothetical protein. | DNA polymerase III, delta' subunit. | 0.670 |
EGJ45790.1 | EGJ45791.2 | HMPREF0866_02567 | HMPREF0866_02568 | Hypothetical protein. | Hypothetical protein. | 0.714 |
EGJ45791.2 | EGJ45789.2 | HMPREF0866_02568 | HMPREF0866_02566 | Hypothetical protein. | DNA polymerase III, delta' subunit. | 0.602 |
EGJ45791.2 | EGJ45790.1 | HMPREF0866_02568 | HMPREF0866_02567 | Hypothetical protein. | Hypothetical protein. | 0.714 |
EGJ45791.2 | EGJ47123.1 | HMPREF0866_02568 | HMPREF0866_00056 | Hypothetical protein. | Hypothetical protein; Belongs to the SEDS family. | 0.403 |
EGJ45791.2 | EGJ48201.1 | HMPREF0866_02568 | HMPREF0866_01161 | Hypothetical protein. | Hypothetical protein. | 0.427 |
EGJ47123.1 | EGJ45791.2 | HMPREF0866_00056 | HMPREF0866_02568 | Hypothetical protein; Belongs to the SEDS family. | Hypothetical protein. | 0.403 |
EGJ47123.1 | EGJ48201.1 | HMPREF0866_00056 | HMPREF0866_01161 | Hypothetical protein; Belongs to the SEDS family. | Hypothetical protein. | 0.691 |
EGJ48201.1 | EGJ45791.2 | HMPREF0866_01161 | HMPREF0866_02568 | Hypothetical protein. | Hypothetical protein. | 0.427 |
EGJ48201.1 | EGJ47123.1 | HMPREF0866_01161 | HMPREF0866_00056 | Hypothetical protein. | Hypothetical protein; Belongs to the SEDS family. | 0.691 |