Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EGJ45692.1 | EGJ45800.1 | HMPREF0866_02469 | HMPREF0866_02577 | Hypothetical protein. | Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family. | 0.611 |
EGJ45797.1 | EGJ45799.1 | HMPREF0866_02574 | HMPREF0866_02576 | Hypothetical protein; Belongs to the MurCDEF family. MurE subfamily. | Hypothetical protein. | 0.796 |
EGJ45797.1 | EGJ45800.1 | HMPREF0866_02574 | HMPREF0866_02577 | Hypothetical protein; Belongs to the MurCDEF family. MurE subfamily. | Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family. | 0.611 |
EGJ45797.1 | ddl | HMPREF0866_02574 | HMPREF0866_00397 | Hypothetical protein; Belongs to the MurCDEF family. MurE subfamily. | D-alanine-(R)-lactate ligase; Cell wall formation; Belongs to the D-alanine--D-alanine ligase family. | 0.615 |
EGJ45797.1 | ddl-2 | HMPREF0866_02574 | HMPREF0866_00770 | Hypothetical protein; Belongs to the MurCDEF family. MurE subfamily. | D-alanine-D-alanine ligase; Cell wall formation; Belongs to the D-alanine--D-alanine ligase family. | 0.675 |
EGJ45797.1 | murF | HMPREF0866_02574 | HMPREF0866_00771 | Hypothetical protein; Belongs to the MurCDEF family. MurE subfamily. | Hypothetical protein; Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein; Belongs to the MurCDEF family. MurF subfamily. | 0.992 |
EGJ45799.1 | EGJ45797.1 | HMPREF0866_02576 | HMPREF0866_02574 | Hypothetical protein. | Hypothetical protein; Belongs to the MurCDEF family. MurE subfamily. | 0.796 |
EGJ45799.1 | EGJ45800.1 | HMPREF0866_02576 | HMPREF0866_02577 | Hypothetical protein. | Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family. | 0.613 |
EGJ45800.1 | EGJ45692.1 | HMPREF0866_02577 | HMPREF0866_02469 | Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family. | Hypothetical protein. | 0.611 |
EGJ45800.1 | EGJ45797.1 | HMPREF0866_02577 | HMPREF0866_02574 | Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family. | Hypothetical protein; Belongs to the MurCDEF family. MurE subfamily. | 0.611 |
EGJ45800.1 | EGJ45799.1 | HMPREF0866_02577 | HMPREF0866_02576 | Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family. | Hypothetical protein. | 0.613 |
EGJ45800.1 | EGJ45997.1 | HMPREF0866_02577 | HMPREF0866_02149 | Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family. | D-amino-acid transaminase. | 0.818 |
EGJ45800.1 | EGJ46146.1 | HMPREF0866_02577 | HMPREF0866_02301 | Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family. | Hypothetical protein. | 0.806 |
EGJ45800.1 | EGJ47775.1 | HMPREF0866_02577 | HMPREF0866_00722 | Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family. | YjeE family ATPase. | 0.620 |
EGJ45800.1 | EGJ47864.1 | HMPREF0866_02577 | HMPREF0866_00815 | Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family. | Hypothetical protein. | 0.872 |
EGJ45800.1 | ddl | HMPREF0866_02577 | HMPREF0866_00397 | Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family. | D-alanine-(R)-lactate ligase; Cell wall formation; Belongs to the D-alanine--D-alanine ligase family. | 0.763 |
EGJ45800.1 | ddl-2 | HMPREF0866_02577 | HMPREF0866_00770 | Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family. | D-alanine-D-alanine ligase; Cell wall formation; Belongs to the D-alanine--D-alanine ligase family. | 0.686 |
EGJ45800.1 | murF | HMPREF0866_02577 | HMPREF0866_00771 | Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family. | Hypothetical protein; Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein; Belongs to the MurCDEF family. MurF subfamily. | 0.599 |
EGJ45997.1 | EGJ45800.1 | HMPREF0866_02149 | HMPREF0866_02577 | D-amino-acid transaminase. | Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family. | 0.818 |
EGJ45997.1 | EGJ46146.1 | HMPREF0866_02149 | HMPREF0866_02301 | D-amino-acid transaminase. | Hypothetical protein. | 0.813 |
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