STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGJ45525.2Hypothetical protein. (187 aa)    
Predicted Functional Partners:
EGJ45526.1
Hypothetical protein.
 
     0.857
EGJ45527.1
Hypothetical protein.
 
     0.841
EGJ46583.2
Hypothetical protein.
  
     0.625
EGJ45521.1
Hypothetical protein.
  
     0.577
EGJ45558.1
Hypothetical protein.
  
     0.571
EGJ45524.2
Hypothetical protein.
 
     0.570
EQN61066.1
Hypothetical protein.
 
     0.555
EGJ45205.2
Hypothetical protein.
 
     0.547
EGJ47445.1
Hypothetical protein.
  
     0.544
EGJ45543.1
Hypothetical protein.
  
     0.486
Your Current Organism:
Ruminococcaceae bacterium D16
NCBI taxonomy Id: 552398
Other names: R. bacterium D16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.