STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGJ45362.2Hypothetical protein. (102 aa)    
Predicted Functional Partners:
EGJ45360.1
Hypothetical protein.
 
     0.737
EGJ45345.2
Hypothetical protein.
 
     0.736
EGJ46303.2
Hypothetical protein.
  
     0.694
EQN60271.1
Hypothetical protein.
 
     0.690
EGJ45344.1
Hypothetical protein.
 
     0.671
EGJ45346.1
Hypothetical protein.
 
     0.659
EGJ45358.1
Hypothetical protein.
 
     0.650
EGJ45255.1
Hypothetical protein.
  
     0.643
EQN61059.1
Hypothetical protein.
  
     0.642
EGJ45343.1
Hypothetical protein.
 
     0.637
Your Current Organism:
Ruminococcaceae bacterium D16
NCBI taxonomy Id: 552398
Other names: R. bacterium D16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.