STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGJ45310.2Hypothetical protein. (652 aa)    
Predicted Functional Partners:
EGJ45309.1
Hypothetical protein.
 
 
 0.978
EGJ45300.1
Hypothetical protein.
 
     0.805
EGJ46081.1
Hypothetical protein.
 
 
 0.653
EGJ46072.2
Hypothetical protein.
 
     0.577
EGJ46482.2
Nicotinamide mononucleotide transporter PnuC.
  
     0.560
EGJ45311.2
Hypothetical protein.
       0.550
EGJ45312.1
Hypothetical protein.
       0.529
EGJ45313.1
Hypothetical protein.
       0.529
EGJ45308.1
Hypothetical protein.
       0.527
EGJ45294.1
Hypothetical protein.
 
    0.525
Your Current Organism:
Ruminococcaceae bacterium D16
NCBI taxonomy Id: 552398
Other names: R. bacterium D16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.