STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EQN61096.1Type IV secretion system protein VirD4. (587 aa)    
Predicted Functional Partners:
EQN61095.1
Hypothetical protein.
 
     0.918
EGJ47935.1
Hypothetical protein.
 
     0.854
EQN61074.1
Hypothetical protein.
  
    0.773
EQN61094.1
Hypothetical protein.
  
    0.773
EGJ47150.1
Hypothetical protein.
 
     0.732
EGJ47938.1
Hypothetical protein.
  
     0.697
EGJ47152.1
Hypothetical protein.
 
    0.696
EGJ47933.1
Hypothetical protein.
  
     0.681
EGJ45353.2
Hypothetical protein.
  
    0.658
EGJ46294.2
Hypothetical protein.
  
    0.657
Your Current Organism:
Ruminococcaceae bacterium D16
NCBI taxonomy Id: 552398
Other names: R. bacterium D16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.