node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ADJ25388.1 | ADJ26786.1 | Dehly_0054 | Dehly_1502 | KEGG: dev:DhcVS_200 ABC transporter, ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase. | KEGG: sti:Sthe_1974 selenocysteine-specific translation elongation factor; TIGRFAM: selenocysteine-specific translation elongation factor; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; Elongation factor SelB winged helix 2; Elongation factor SelB winged helix 3. | 0.921 |
ADJ25388.1 | rplC | Dehly_0054 | Dehly_1097 | KEGG: dev:DhcVS_200 ABC transporter, ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase. | 50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. | 0.883 |
ADJ25388.1 | rplD | Dehly_0054 | Dehly_1096 | KEGG: dev:DhcVS_200 ABC transporter, ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase. | Ribosomal protein L4/L1e; Forms part of the polypeptide exit tunnel. | 0.886 |
ADJ25388.1 | rplT | Dehly_0054 | Dehly_0821 | KEGG: dev:DhcVS_200 ABC transporter, ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase. | Ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit. | 0.882 |
ADJ25388.1 | rplU | Dehly_0054 | Dehly_0201 | KEGG: dev:DhcVS_200 ABC transporter, ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase. | Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. | 0.879 |
ADJ25388.1 | rpmA | Dehly_0054 | Dehly_0202 | KEGG: dev:DhcVS_200 ABC transporter, ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase. | KEGG: deg:DehalGT_1062 ribosomal protein L27; TIGRFAM: ribosomal protein L27; PFAM: ribosomal protein L27; Belongs to the bacterial ribosomal protein bL27 family. | 0.879 |
ADJ25388.1 | rpsC | Dehly_0054 | Dehly_1091 | KEGG: dev:DhcVS_200 ABC transporter, ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase. | Ribosomal protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family. | 0.876 |
ADJ25388.1 | rpsG | Dehly_0054 | Dehly_1100 | KEGG: dev:DhcVS_200 ABC transporter, ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase. | Ribosomal protein S7; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family. | 0.879 |
ADJ25388.1 | rpsL | Dehly_0054 | Dehly_1101 | KEGG: dev:DhcVS_200 ABC transporter, ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase. | Ribosomal protein S12; Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit. | 0.877 |
ADJ25388.1 | rpsO | Dehly_0054 | Dehly_0535 | KEGG: dev:DhcVS_200 ABC transporter, ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase. | Ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome. | 0.877 |
ADJ26786.1 | ADJ25388.1 | Dehly_1502 | Dehly_0054 | KEGG: sti:Sthe_1974 selenocysteine-specific translation elongation factor; TIGRFAM: selenocysteine-specific translation elongation factor; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; Elongation factor SelB winged helix 2; Elongation factor SelB winged helix 3. | KEGG: dev:DhcVS_200 ABC transporter, ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase. | 0.921 |
ADJ26786.1 | rplC | Dehly_1502 | Dehly_1097 | KEGG: sti:Sthe_1974 selenocysteine-specific translation elongation factor; TIGRFAM: selenocysteine-specific translation elongation factor; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; Elongation factor SelB winged helix 2; Elongation factor SelB winged helix 3. | 50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. | 0.880 |
ADJ26786.1 | rplD | Dehly_1502 | Dehly_1096 | KEGG: sti:Sthe_1974 selenocysteine-specific translation elongation factor; TIGRFAM: selenocysteine-specific translation elongation factor; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; Elongation factor SelB winged helix 2; Elongation factor SelB winged helix 3. | Ribosomal protein L4/L1e; Forms part of the polypeptide exit tunnel. | 0.989 |
ADJ26786.1 | rplT | Dehly_1502 | Dehly_0821 | KEGG: sti:Sthe_1974 selenocysteine-specific translation elongation factor; TIGRFAM: selenocysteine-specific translation elongation factor; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; Elongation factor SelB winged helix 2; Elongation factor SelB winged helix 3. | Ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit. | 0.532 |
ADJ26786.1 | rplU | Dehly_1502 | Dehly_0201 | KEGG: sti:Sthe_1974 selenocysteine-specific translation elongation factor; TIGRFAM: selenocysteine-specific translation elongation factor; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; Elongation factor SelB winged helix 2; Elongation factor SelB winged helix 3. | Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. | 0.568 |
ADJ26786.1 | rpmA | Dehly_1502 | Dehly_0202 | KEGG: sti:Sthe_1974 selenocysteine-specific translation elongation factor; TIGRFAM: selenocysteine-specific translation elongation factor; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; Elongation factor SelB winged helix 2; Elongation factor SelB winged helix 3. | KEGG: deg:DehalGT_1062 ribosomal protein L27; TIGRFAM: ribosomal protein L27; PFAM: ribosomal protein L27; Belongs to the bacterial ribosomal protein bL27 family. | 0.517 |
ADJ26786.1 | rpsC | Dehly_1502 | Dehly_1091 | KEGG: sti:Sthe_1974 selenocysteine-specific translation elongation factor; TIGRFAM: selenocysteine-specific translation elongation factor; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; Elongation factor SelB winged helix 2; Elongation factor SelB winged helix 3. | Ribosomal protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family. | 0.994 |
ADJ26786.1 | rpsG | Dehly_1502 | Dehly_1100 | KEGG: sti:Sthe_1974 selenocysteine-specific translation elongation factor; TIGRFAM: selenocysteine-specific translation elongation factor; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; Elongation factor SelB winged helix 2; Elongation factor SelB winged helix 3. | Ribosomal protein S7; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family. | 0.989 |
ADJ26786.1 | rpsL | Dehly_1502 | Dehly_1101 | KEGG: sti:Sthe_1974 selenocysteine-specific translation elongation factor; TIGRFAM: selenocysteine-specific translation elongation factor; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; Elongation factor SelB winged helix 2; Elongation factor SelB winged helix 3. | Ribosomal protein S12; Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit. | 0.989 |
ADJ26786.1 | rpsO | Dehly_1502 | Dehly_0535 | KEGG: sti:Sthe_1974 selenocysteine-specific translation elongation factor; TIGRFAM: selenocysteine-specific translation elongation factor; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; Elongation factor SelB winged helix 2; Elongation factor SelB winged helix 3. | Ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome. | 0.989 |