STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADJ25411.1PFAM: DNA methylase N-4/N-6 domain protein; KEGG: tvo:TVN1413 adenine-specific DNA methylase; Belongs to the N(4)/N(6)-methyltransferase family. (326 aa)    
Predicted Functional Partners:
ADJ25410.1
KEGG: cch:Cag_1401 hypothetical protein.
 
     0.949
ADJ25409.1
PFAM: protein of unknown function DUF114; KEGG: ckr:CKR_0965 hypothetical protein.
  
    0.509
ADJ26452.1
Site-specific DNA-methyltransferase (adenine-specific); KEGG: blt:Balat_1447 modification methylase (adenine-specificmethyltransferase).
  
  
 0.469
ADJ26433.1
PAS/PAC sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; PAS fold-3 domain protein; PAS fold domain protein; PAS fold-4 domain protein; histidine kinase A domain protein; response regulator receiver; KEGG: deh:cbdb_A989 sensor histidine kinase/response regulator; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS domain containing protein; PAC repeat-containing protein; response regulator receiver.
   
  
 0.421
ADJ25412.1
Hypothetical protein; KEGG: dno:DNO_1352 peptidyl-dipeptidase II.
       0.417
ADJ25413.1
KEGG: mxa:MXAN_5861 hypothetical protein.
       0.417
ADJ25387.1
PAS/PAC sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold domain protein; response regulator receiver; KEGG: deg:DehalGT_0858 PAS/PAC sensor hybrid histidine kinase; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS domain containing protein; response regulator receiver.
  
  
 0.404
Your Current Organism:
Dehalogenimonas lykanthroporepellens
NCBI taxonomy Id: 552811
Other names: Chloroflexi bacterium BL-DC-8, Chloroflexi bacterium BL-DC-9, D. lykanthroporepellens BL-DC-9, Dehalogenimonas lykanthroporepellens BL-DC-9, Dehalogenimonas lykanthroporepellens str. BL-DC-9, Dehalogenimonas lykanthroporepellens strain BL-DC-9
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