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Dehly_0090 protein (Dehalogenimonas lykanthroporepellens) - STRING interaction network
"Dehly_0090" - Cation transporter in Dehalogenimonas lykanthroporepellens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Dehly_0090Cation transporter (484 aa)    
Predicted Functional Partners:
Dehly_0089
TrkA-N domain-containing protein (454 aa)
 
 
  0.998
Dehly_1507
TrkA-N domain-containing protein (220 aa)
 
 
  0.990
Dehly_1508
TrkA-N domain-containing protein (132 aa)
 
 
  0.982
Dehly_1120
Sodium/hydrogen exchanger (565 aa)
     
 
  0.934
Dehly_0770
Sodium/hydrogen exchanger (594 aa)
     
 
  0.660
Dehly_0999
Winged helix family two component transcriptional regulator (232 aa)
         
  0.488
Dehly_0884
Winged helix family two component transcriptional regulator (227 aa)
         
  0.488
Dehly_0866
Winged helix family two component transcriptional regulator (233 aa)
         
  0.488
fmt
methionyl-tRNA formyltransferase; Modifies the free amino group of the aminoacyl moiety of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by- (I) promoting its recognition by IF2 and (II) impairing its binding to EFTu-GTP (318 aa)
   
   
  0.481
Dehly_0088
Cation diffusion facilitator family transporter (316 aa)
   
        0.470
Your Current Organism:
Dehalogenimonas lykanthroporepellens
NCBI taxonomy Id: 552811
Other names: Chloroflexi bacterium BL-DC-8, Chloroflexi bacterium BL-DC-9, D. lykanthroporepellens, D. lykanthroporepellens BL-DC-9, Dehalogenimonas, Dehalogenimonas lykanthroporepellens, Dehalogenimonas lykanthroporepellens BL-DC-9, Dehalogenimonas lykanthroporepellens str. BL-DC-9, Dehalogenimonas lykanthroporepellens strain BL-DC-9
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