STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADJ25915.1KEGG: ttr:Tter_1193 phosphoesterase PA-phosphatase related protein; PFAM: phosphoesterase PA-phosphatase related; SMART: phosphoesterase PA-phosphatase related. (197 aa)    
Predicted Functional Partners:
ADJ25916.1
KEGG: ttr:Tter_1192 hypothetical protein.
       0.773
ADJ26100.1
PFAM: AMP-dependent synthetase and ligase; KEGG: det:DET1033 long-chain-fatty-acid--CoA ligase, putative.
    
 0.744
rplF
Ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family.
    
  0.722
ADJ25917.1
KEGG: det:DET1252 hypothetical protein.
       0.651
ADJ25913.1
KEGG: hypothetical protein.
       0.545
ADJ25914.1
KEGG: hau:Haur_0843 hypothetical protein.
       0.543
ADJ26498.1
KEGG: mta:Moth_1994 heavy metal translocating P-type ATPase; TIGRFAM: heavy metal translocating P-type ATPase; copper-translocating P-type ATPase; copper ion binding protein; ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase-associated domain protein; Heavy metal transport/detoxification protein; Haloacid dehalogenase domain protein hydrolase.
     
 0.483
cetZ
Tubulin/FtsZ GTPase; Involved in cell shape control; Belongs to the CetZ family.
       0.442
ADJ25912.1
PFAM: protein of unknown function UPF0118; KEGG: sti:Sthe_1109 protein of unknown function UPF0118.
  
    0.411
Your Current Organism:
Dehalogenimonas lykanthroporepellens
NCBI taxonomy Id: 552811
Other names: Chloroflexi bacterium BL-DC-8, Chloroflexi bacterium BL-DC-9, D. lykanthroporepellens BL-DC-9, Dehalogenimonas lykanthroporepellens BL-DC-9, Dehalogenimonas lykanthroporepellens str. BL-DC-9, Dehalogenimonas lykanthroporepellens strain BL-DC-9
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