STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADJ26206.1KEGG: deg:DehalGT_0061 hypothetical protein. (515 aa)    
Predicted Functional Partners:
ADJ26204.1
PFAM: protein of unknown function DUF105; KEGG: deb:DehaBAV1_0623 hypothetical protein.
 
     0.792
ADJ26205.1
PFAM: ADP-ribosylation/Crystallin J1; KEGG: gbm:Gbem_2034 ADP-ribosylation/Crystallin J1.
       0.774
ADJ26207.1
TIGRFAM: twitching motility protein; PFAM: type II secretion system protein E; KEGG: deg:DehalGT_0767 twitching motility protein; SMART: AAA ATPase.
       0.580
ADJ26203.1
KEGG: deb:DehaBAV1_0279 radical SAM domain-containing protein; PFAM: Radical SAM domain protein; cobalamin B12-binding domain protein; SMART: Elongator protein 3/MiaB/NifB.
       0.544
Your Current Organism:
Dehalogenimonas lykanthroporepellens
NCBI taxonomy Id: 552811
Other names: Chloroflexi bacterium BL-DC-8, Chloroflexi bacterium BL-DC-9, D. lykanthroporepellens BL-DC-9, Dehalogenimonas lykanthroporepellens BL-DC-9, Dehalogenimonas lykanthroporepellens str. BL-DC-9, Dehalogenimonas lykanthroporepellens strain BL-DC-9
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.