STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADJ26538.1PFAM: DNA polymerase beta domain protein region; KEGG: deg:DehalGT_1266 DNA polymerase beta domain protein region. (204 aa)    
Predicted Functional Partners:
ADJ26539.1
KEGG: det:DET1517 hypothetical protein.
       0.783
ADJ26533.1
KEGG: syn:sll0385 ABC transporter; PFAM: ABC transporter related; SMART: AAA ATPase.
       0.522
ADJ26534.1
KEGG: ter:Tery_2781 cobalt ABC transporter, inner membrane subunit CbiQ; TIGRFAM: cobalt ABC transporter, inner membrane subunit CbiQ; PFAM: cobalt transport protein.
       0.522
ADJ26535.1
PFAM: cobalamin (vitamin B12) biosynthesis CbiM protein; KEGG: syn:sll0383 cobalt transport protein CbiM.
       0.522
ADJ26536.1
KEGG: syn:sll0382 hypothetical protein.
       0.522
ADJ26537.1
KEGG: ter:Tery_2785 hypothetical protein.
       0.522
Your Current Organism:
Dehalogenimonas lykanthroporepellens
NCBI taxonomy Id: 552811
Other names: Chloroflexi bacterium BL-DC-8, Chloroflexi bacterium BL-DC-9, D. lykanthroporepellens BL-DC-9, Dehalogenimonas lykanthroporepellens BL-DC-9, Dehalogenimonas lykanthroporepellens str. BL-DC-9, Dehalogenimonas lykanthroporepellens strain BL-DC-9
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