STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADJ26703.1Protein of unknown function DUF21; KEGG: deb:DehaBAV1_1233 hypothetical protein; PFAM: protein of unknown function DUF21; CBS domain containing protein; transporter-associated region; SMART: CBS domain containing protein. (432 aa)    
Predicted Functional Partners:
ADJ26705.1
PFAM: peptidase M48 Ste24p; KEGG: det:DET1423 M48 family peptidase.
  
    0.617
guaA
GMP synthase, large subunit; Catalyzes the synthesis of GMP from XMP.
  
  
 0.597
ADJ26704.1
PFAM: Protein of unknown function DUF2344; KEGG: deb:DehaBAV1_1232 hypothetical protein.
       0.591
ADJ26701.1
KEGG: deb:DehaBAV1_1243 hydrogenase expression/formation protein HypE; TIGRFAM: hydrogenase expression/formation protein HypE; PFAM: AIR synthase related protein domain protein; AIR synthase related protein.
       0.497
ybeY
Protein of unknown function UPF0054; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.
  
  
 0.481
ADJ26706.1
KEGG: mar:MAE_55730 hypothetical protein.
       0.459
ADJ26707.1
YcfA family protein; KEGG: mar:MAE_55720 hypothetical protein; manually curated; PFAM: YcfA family protein.
       0.459
ADJ26708.1
PFAM: Phosphoglycerate mutase; KEGG: deg:DehalGT_1140 phosphoglycerate mutase.
       0.459
ADJ26424.1
KEGG: deb:DehaBAV1_0374 HAD family hydrolase; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; peptidase M22 glycoprotease.
 
  
 0.440
hypA
Hydrogenase nickel insertion protein HypA; Involved in the maturation of [NiFe] hydrogenases. Required for nickel insertion into the metal center of the hydrogenase.
       0.421
Your Current Organism:
Dehalogenimonas lykanthroporepellens
NCBI taxonomy Id: 552811
Other names: Chloroflexi bacterium BL-DC-8, Chloroflexi bacterium BL-DC-9, D. lykanthroporepellens BL-DC-9, Dehalogenimonas lykanthroporepellens BL-DC-9, Dehalogenimonas lykanthroporepellens str. BL-DC-9, Dehalogenimonas lykanthroporepellens strain BL-DC-9
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