STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADJ26872.1PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rpt:Rpal_2894 binding-protein-dependent transport systems inner membrane component. (267 aa)    
Predicted Functional Partners:
ADJ26871.1
ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components-like protein; KEGG: str:Sterm_0481 NMT1/THI5 like domain protein.
 
 0.999
ADJ26873.1
ABC transporter related protein; KEGG: bxe:Bxe_C0116 nitrate/sulfonate/bicarbonate ABC transporter ATPase; PFAM: ABC transporter related; SMART: AAA ATPase.
  
 0.996
ADJ26874.1
KEGG: drm:Dred_0361 hypothetical protein.
 
    0.715
ADJ26875.1
PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: gvi:gll0765 cysteine synthase.
     
 0.672
ADJ26876.1
KEGG: dhd:Dhaf_4106 SirA family protein.
  
    0.658
ADJ26870.1
PFAM: nitrite and sulphite reductase 4Fe-4S region; nitrite/sulfite reductase hemoprotein beta-component ferrodoxin domain protein; 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: cbi:CLJ_B1955 sulfite/nitrite reductase family protein.
       0.459
Your Current Organism:
Dehalogenimonas lykanthroporepellens
NCBI taxonomy Id: 552811
Other names: Chloroflexi bacterium BL-DC-8, Chloroflexi bacterium BL-DC-9, D. lykanthroporepellens BL-DC-9, Dehalogenimonas lykanthroporepellens BL-DC-9, Dehalogenimonas lykanthroporepellens str. BL-DC-9, Dehalogenimonas lykanthroporepellens strain BL-DC-9
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