STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADJ26888.1KEGG: msl:Msil_1948 type III restriction protein res subunit; PFAM: type III restriction protein res subunit. (992 aa)    
Predicted Functional Partners:
ADJ26890.1
KEGG: msl:Msil_1946 site-specific DNA-methyltransferase (adenine-specific); PFAM: DNA methylase N-4/N-6 domain protein.
  
 0.974
ADJ26891.1
SNF2-related protein; KEGG: cph:Cpha266_1953 helicase domain-containing protein; PFAM: SNF2-related protein; SMART: DEAD-like helicase.
    0.892
ADJ26889.1
KEGG: mma:MM_2203 hypothetical protein.
       0.798
ADJ26887.1
PFAM: protein of unknown function DUF195; KEGG: dap:Dacet_1804 hypothetical protein.
       0.727
ADJ26544.1
KEGG: deb:DehaBAV1_0183 helicase domain-containing protein; PFAM: helicase domain protein; SNF2-related protein; SMART: helicase domain protein; DEAD-like helicase.
 
    0.584
ADJ26886.1
Na+/Ca+ antiporter, CaCA family; KEGG: dde:Dde_1854 K+-dependent Na+/Ca+ exchanger related-protein; TIGRFAM: Na+/Ca+ antiporter, CaCA family; PFAM: sodium/calcium exchanger membrane region.
       0.458
Your Current Organism:
Dehalogenimonas lykanthroporepellens
NCBI taxonomy Id: 552811
Other names: Chloroflexi bacterium BL-DC-8, Chloroflexi bacterium BL-DC-9, D. lykanthroporepellens BL-DC-9, Dehalogenimonas lykanthroporepellens BL-DC-9, Dehalogenimonas lykanthroporepellens str. BL-DC-9, Dehalogenimonas lykanthroporepellens strain BL-DC-9
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.