STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADJ26933.1KEGG: sfu:Sfum_3817 hypothetical protein. (225 aa)    
Predicted Functional Partners:
ADJ26934.1
PFAM: conserved hypothetical protein; KEGG: sfu:Sfum_3816 hypothetical protein.
       0.770
ADJ26935.1
PFAM: tail sheath protein; KEGG: sfu:Sfum_3815 phage tail sheath protein.
  
  
 0.750
ADJ26936.1
KEGG: dde:Dde_0930 hypothetical protein.
       0.743
ADJ26937.1
KEGG: sfu:Sfum_3813 hypothetical protein.
       0.730
ADJ26929.1
KEGG: sfu:Sfum_3821 hypothetical protein.
  
    0.550
ADJ26930.1
KEGG: sfu:Sfum_3820 hypothetical protein.
       0.539
ADJ26931.1
KEGG: sfu:Sfum_3819 hypothetical protein.
       0.486
ADJ26932.1
KEGG: sfu:Sfum_3818 TP901 family phage tail tape measure protein; TIGRFAM: phage tail tape measure protein, TP901 family; PFAM: tail tape measure protein TP901 core region.
       0.482
ADJ26925.1
KEGG: sfu:Sfum_3825 hypothetical protein.
     
 0.451
ADJ26928.1
KEGG: dde:Dde_0938 phage protein D-like.
       0.450
Your Current Organism:
Dehalogenimonas lykanthroporepellens
NCBI taxonomy Id: 552811
Other names: Chloroflexi bacterium BL-DC-8, Chloroflexi bacterium BL-DC-9, D. lykanthroporepellens BL-DC-9, Dehalogenimonas lykanthroporepellens BL-DC-9, Dehalogenimonas lykanthroporepellens str. BL-DC-9, Dehalogenimonas lykanthroporepellens strain BL-DC-9
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.