STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADJ26954.1TIGRFAM: DNA binding domain protein, excisionase family; KEGG: pap:PSPA7_3695 putative helicase. (119 aa)    
Predicted Functional Partners:
ADJ26955.1
PFAM: transcription elongation factor GreA/GreB domain protein; KEGG: cli:Clim_0577 superfamily I DNA and RNA helicase subunits-like protein.
 
    0.861
ADJ26953.1
Site-specific DNA-methyltransferase (adenine-specific); KEGG: sfu:Sfum_3806 D12 class N6 adenine-specific DNA methyltransferase; PFAM: D12 class N6 adenine-specific DNA methyltransferase.
       0.552
ADJ26952.1
KEGG: dde:Dde_0923 hypothetical protein.
       0.541
ADJ26951.1
KEGG: dde:Dde_0924 hypothetical protein.
       0.512
ADJ26948.1
KEGG: dde:Dde_0927 hypothetical protein.
       0.482
ADJ26949.1
KEGG: sfu:Sfum_3810 hypothetical protein.
       0.482
ADJ26950.1
KEGG: dde:Dde_0925 hypothetical protein.
       0.482
Your Current Organism:
Dehalogenimonas lykanthroporepellens
NCBI taxonomy Id: 552811
Other names: Chloroflexi bacterium BL-DC-8, Chloroflexi bacterium BL-DC-9, D. lykanthroporepellens BL-DC-9, Dehalogenimonas lykanthroporepellens BL-DC-9, Dehalogenimonas lykanthroporepellens str. BL-DC-9, Dehalogenimonas lykanthroporepellens strain BL-DC-9
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.