node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ADK96197.1 | ADK97352.1 | HMPREF0659_A5662 | HMPREF0659_A6487 | Respiratory-chain NADH dehydrogenase, 49 Kd subunit; Identified by match to protein family HMM PF00329; match to protein family HMM PF00346. | ATP synthase, delta/epsilon subunit, beta-sandwich domain protein; Identified by match to protein family HMM PF02823. | 0.992 |
ADK96197.1 | atpA | HMPREF0659_A5662 | HMPREF0659_A6493 | Respiratory-chain NADH dehydrogenase, 49 Kd subunit; Identified by match to protein family HMM PF00329; match to protein family HMM PF00346. | ATP synthase F1, alpha subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. Belongs to the ATPase alpha/beta chains family. | 0.995 |
ADK96197.1 | atpB | HMPREF0659_A5662 | HMPREF0659_A6489 | Respiratory-chain NADH dehydrogenase, 49 Kd subunit; Identified by match to protein family HMM PF00329; match to protein family HMM PF00346. | ATP synthase F0, A subunit; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane. | 0.725 |
ADK96197.1 | atpD | HMPREF0659_A5662 | HMPREF0659_A6486 | Respiratory-chain NADH dehydrogenase, 49 Kd subunit; Identified by match to protein family HMM PF00329; match to protein family HMM PF00346. | ATP synthase F1, beta subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits; Belongs to the ATPase alpha/beta chains family. | 0.902 |
ADK96197.1 | atpE | HMPREF0659_A5662 | HMPREF0659_A6490 | Respiratory-chain NADH dehydrogenase, 49 Kd subunit; Identified by match to protein family HMM PF00329; match to protein family HMM PF00346. | ATP synthase F0, C subunit; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation. | 0.821 |
ADK96197.1 | atpF | HMPREF0659_A5662 | HMPREF0659_A6491 | Respiratory-chain NADH dehydrogenase, 49 Kd subunit; Identified by match to protein family HMM PF00329; match to protein family HMM PF00346. | ATP synthase F0, B subunit; Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0); Belongs to the ATPase B chain family. | 0.794 |
ADK96197.1 | atpG | HMPREF0659_A5662 | HMPREF0659_A6494 | Respiratory-chain NADH dehydrogenase, 49 Kd subunit; Identified by match to protein family HMM PF00329; match to protein family HMM PF00346. | ATP synthase F1, gamma subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex. | 0.987 |
ADK96197.1 | atpH | HMPREF0659_A5662 | HMPREF0659_A6492 | Respiratory-chain NADH dehydrogenase, 49 Kd subunit; Identified by match to protein family HMM PF00329; match to protein family HMM PF00346. | ATP synthase F1, delta subunit; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation; Belongs to the ATPase delta chain family. | 0.993 |
ADK96197.1 | rplP | HMPREF0659_A5662 | HMPREF0659_A5322 | Respiratory-chain NADH dehydrogenase, 49 Kd subunit; Identified by match to protein family HMM PF00329; match to protein family HMM PF00346. | Ribosomal protein L16; Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs; Belongs to the universal ribosomal protein uL16 family. | 0.601 |
ADK96197.1 | rpsC | HMPREF0659_A5662 | HMPREF0659_A5321 | Respiratory-chain NADH dehydrogenase, 49 Kd subunit; Identified by match to protein family HMM PF00329; match to protein family HMM PF00346. | Ribosomal protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family. | 0.446 |
ADK97352.1 | ADK96197.1 | HMPREF0659_A6487 | HMPREF0659_A5662 | ATP synthase, delta/epsilon subunit, beta-sandwich domain protein; Identified by match to protein family HMM PF02823. | Respiratory-chain NADH dehydrogenase, 49 Kd subunit; Identified by match to protein family HMM PF00329; match to protein family HMM PF00346. | 0.992 |
ADK97352.1 | atpA | HMPREF0659_A6487 | HMPREF0659_A6493 | ATP synthase, delta/epsilon subunit, beta-sandwich domain protein; Identified by match to protein family HMM PF02823. | ATP synthase F1, alpha subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. Belongs to the ATPase alpha/beta chains family. | 0.999 |
ADK97352.1 | atpB | HMPREF0659_A6487 | HMPREF0659_A6489 | ATP synthase, delta/epsilon subunit, beta-sandwich domain protein; Identified by match to protein family HMM PF02823. | ATP synthase F0, A subunit; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane. | 0.999 |
ADK97352.1 | atpD | HMPREF0659_A6487 | HMPREF0659_A6486 | ATP synthase, delta/epsilon subunit, beta-sandwich domain protein; Identified by match to protein family HMM PF02823. | ATP synthase F1, beta subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits; Belongs to the ATPase alpha/beta chains family. | 0.999 |
ADK97352.1 | atpE | HMPREF0659_A6487 | HMPREF0659_A6490 | ATP synthase, delta/epsilon subunit, beta-sandwich domain protein; Identified by match to protein family HMM PF02823. | ATP synthase F0, C subunit; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation. | 0.999 |
ADK97352.1 | atpF | HMPREF0659_A6487 | HMPREF0659_A6491 | ATP synthase, delta/epsilon subunit, beta-sandwich domain protein; Identified by match to protein family HMM PF02823. | ATP synthase F0, B subunit; Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0); Belongs to the ATPase B chain family. | 0.998 |
ADK97352.1 | atpG | HMPREF0659_A6487 | HMPREF0659_A6494 | ATP synthase, delta/epsilon subunit, beta-sandwich domain protein; Identified by match to protein family HMM PF02823. | ATP synthase F1, gamma subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex. | 0.999 |
ADK97352.1 | atpH | HMPREF0659_A6487 | HMPREF0659_A6492 | ATP synthase, delta/epsilon subunit, beta-sandwich domain protein; Identified by match to protein family HMM PF02823. | ATP synthase F1, delta subunit; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation; Belongs to the ATPase delta chain family. | 0.999 |
ADK97352.1 | rplP | HMPREF0659_A6487 | HMPREF0659_A5322 | ATP synthase, delta/epsilon subunit, beta-sandwich domain protein; Identified by match to protein family HMM PF02823. | Ribosomal protein L16; Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs; Belongs to the universal ribosomal protein uL16 family. | 0.620 |
ADK97352.1 | rpsC | HMPREF0659_A6487 | HMPREF0659_A5321 | ATP synthase, delta/epsilon subunit, beta-sandwich domain protein; Identified by match to protein family HMM PF02823. | Ribosomal protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family. | 0.474 |