STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEN82666.1Hypothetical protein. (95 aa)    
Predicted Functional Partners:
nifJ
Pyruvate synthase; Identified by match to protein family HMM PF00037; match to protein family HMM PF01558; match to protein family HMM PF01855; match to protein family HMM TIGR02176.
     
 0.920
EEN82779.1
Hypothetical protein.
 
    
0.826
EEN83286.1
Hypothetical protein.
  
     0.750
EEN83205.1
Hypothetical protein.
  
     0.744
EEN83212.1
Hypothetical protein.
  
     0.716
EEN83284.1
Identified by match to protein family HMM PF08989.
  
     0.714
EEN83266.1
Hypothetical protein.
  
     0.710
EEN83167.1
Hypothetical protein.
  
     0.702
EEN83265.1
Relaxase/mobilization nuclease domain protein; Identified by match to protein family HMM PF03432.
  
     0.675
EEN83268.1
Hypothetical protein.
  
     0.661
Your Current Organism:
Porphyromonas endodontalis
NCBI taxonomy Id: 553175
Other names: P. endodontalis ATCC 35406, Porphyromonas endodontalis ATCC 35406, Porphyromonas endodontalis str. ATCC 35406, Porphyromonas endodontalis strain ATCC 35406
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