STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEN83379.1Leucine Rich Repeat protein. (607 aa)    
Predicted Functional Partners:
EEN81883.1
Leucine Rich Repeat protein.
  
     0.774
EEN83086.1
Leucine Rich Repeat protein.
  
     0.774
EEN83363.1
Hypothetical protein.
 
     0.727
EEN83307.1
Beta-lactamase; Identified by match to protein family HMM PF00144; match to protein family HMM PF00933.
     
 0.571
guaA
GMP synthase (glutamine-hydrolyzing) domain protein; Catalyzes the synthesis of GMP from XMP.
    
  0.512
EEN83253.1
Inosine 5-monophosphate dehydrogenase; Identified by match to protein family HMM PF00478; match to protein family HMM PF00571.
   
 
  0.497
EEN83378.1
N-acetylmuramoyl-L-alanine amidase; Identified by match to protein family HMM PF01520.
  
 
  0.496
EEN83453.1
Competence/damage-inducible domain protein CinA; Identified by match to protein family HMM PF02464; match to protein family HMM TIGR00199; Belongs to the CinA family.
  
  
  0.439
EEN83771.1
Hypothetical protein.
   
 
  0.434
EEN83456.1
Hypothetical protein; Identified by glimmer; putative.
       0.427
Your Current Organism:
Porphyromonas endodontalis
NCBI taxonomy Id: 553175
Other names: P. endodontalis ATCC 35406, Porphyromonas endodontalis ATCC 35406, Porphyromonas endodontalis str. ATCC 35406, Porphyromonas endodontalis strain ATCC 35406
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