STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEN83457.1Identified by match to protein family HMM PF00582. (393 aa)    
Predicted Functional Partners:
EEN82677.1
Hypothetical protein.
  
     0.768
EEN83411.1
Hypothetical protein.
 
    0.765
EEN82757.1
Tetratricopeptide repeat protein; Identified by match to protein family HMM PF00515; match to protein family HMM PF07719.
  
     0.762
EEN82320.1
Hypothetical protein.
  
     0.757
EEN83143.1
Hypothetical protein.
  
     0.755
EEN83070.1
Hypothetical protein.
  
     0.752
EEN81872.1
Tetratricopeptide repeat protein.
  
     0.748
EEN82414.1
Hypothetical protein.
  
     0.748
EEN82283.1
Sporulation and cell division repeat protein; Identified by match to protein family HMM PF05036.
  
     0.744
EEN82278.1
Sporulation and cell division repeat protein; Identified by match to protein family HMM PF05036.
  
     0.742
Your Current Organism:
Porphyromonas endodontalis
NCBI taxonomy Id: 553175
Other names: P. endodontalis ATCC 35406, Porphyromonas endodontalis ATCC 35406, Porphyromonas endodontalis str. ATCC 35406, Porphyromonas endodontalis strain ATCC 35406
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