Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| EEN83166.1 | EEN83167.1 | POREN0001_1045 | POREN0001_1017 | Hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a premature stop. | Hypothetical protein. | 0.773 |
| EEN83166.1 | EEN83205.1 | POREN0001_1045 | POREN0001_1025 | Hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a premature stop. | Hypothetical protein. | 0.705 |
| EEN83166.1 | EEN83212.1 | POREN0001_1045 | POREN0001_1006 | Hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a premature stop. | Hypothetical protein. | 0.772 |
| EEN83166.1 | EEN83265.1 | POREN0001_1045 | POREN0001_1026 | Hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a premature stop. | Relaxase/mobilization nuclease domain protein; Identified by match to protein family HMM PF03432. | 0.664 |
| EEN83166.1 | EEN83266.1 | POREN0001_1045 | POREN0001_1037 | Hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a premature stop. | Hypothetical protein. | 0.780 |
| EEN83166.1 | EEN83284.1 | POREN0001_1045 | POREN0001_1042 | Hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a premature stop. | Identified by match to protein family HMM PF08989. | 0.780 |
| EEN83166.1 | EEN83286.1 | POREN0001_1045 | POREN0001_1021 | Hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a premature stop. | Hypothetical protein. | 0.725 |
| EEN83166.1 | EEN83298.1 | POREN0001_1045 | POREN0001_1048 | Hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a premature stop. | DNA binding domain, excisionase family; Identified by match to protein family HMM TIGR01764. | 0.826 |
| EEN83166.1 | traM | POREN0001_1045 | POREN0001_1008 | Hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a premature stop. | Conjugative transposon TraM protein. | 0.750 |
| EEN83167.1 | EEN83166.1 | POREN0001_1017 | POREN0001_1045 | Hypothetical protein. | Hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a premature stop. | 0.773 |
| EEN83167.1 | EEN83205.1 | POREN0001_1017 | POREN0001_1025 | Hypothetical protein. | Hypothetical protein. | 0.785 |
| EEN83167.1 | EEN83212.1 | POREN0001_1017 | POREN0001_1006 | Hypothetical protein. | Hypothetical protein. | 0.816 |
| EEN83167.1 | EEN83265.1 | POREN0001_1017 | POREN0001_1026 | Hypothetical protein. | Relaxase/mobilization nuclease domain protein; Identified by match to protein family HMM PF03432. | 0.787 |
| EEN83167.1 | EEN83266.1 | POREN0001_1017 | POREN0001_1037 | Hypothetical protein. | Hypothetical protein. | 0.774 |
| EEN83167.1 | EEN83284.1 | POREN0001_1017 | POREN0001_1042 | Hypothetical protein. | Identified by match to protein family HMM PF08989. | 0.772 |
| EEN83167.1 | EEN83286.1 | POREN0001_1017 | POREN0001_1021 | Hypothetical protein. | Hypothetical protein. | 0.506 |
| EEN83167.1 | EEN83298.1 | POREN0001_1017 | POREN0001_1048 | Hypothetical protein. | DNA binding domain, excisionase family; Identified by match to protein family HMM TIGR01764. | 0.769 |
| EEN83167.1 | traM | POREN0001_1017 | POREN0001_1008 | Hypothetical protein. | Conjugative transposon TraM protein. | 0.825 |
| EEN83205.1 | EEN83166.1 | POREN0001_1025 | POREN0001_1045 | Hypothetical protein. | Hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a premature stop. | 0.705 |
| EEN83205.1 | EEN83167.1 | POREN0001_1025 | POREN0001_1017 | Hypothetical protein. | Hypothetical protein. | 0.785 |
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