STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEN83545.1Hypothetical protein; Identified by glimmer; putative. (194 aa)    
Predicted Functional Partners:
EEN83764.1
Chromate transport protein; Identified by match to protein family HMM PF02417.
       0.618
chrA
Chromate transport protein; Identified by match to protein family HMM PF02417.
       0.573
gldN
Gliding motility-associated protein GldN; Identified by match to protein family HMM TIGR03523.
       0.565
gldM
Gliding motility-associated protein GldM; Identified by match to protein family HMM TIGR03517.
       0.565
gldL
Gliding motility-associated protein GldL; Identified by match to protein family HMM TIGR03513.
       0.547
gldK
Putative gliding motility-associated lipoprotein GldK; Identified by match to protein family HMM PF03781.
       0.536
EEN83571.1
Hypothetical protein; Identified by glimmer; putative.
      
0.489
Your Current Organism:
Porphyromonas endodontalis
NCBI taxonomy Id: 553175
Other names: P. endodontalis ATCC 35406, Porphyromonas endodontalis ATCC 35406, Porphyromonas endodontalis str. ATCC 35406, Porphyromonas endodontalis strain ATCC 35406
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.