STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEN82891.1Hypothetical protein; Identified by glimmer; putative. (784 aa)    
Predicted Functional Partners:
EEN83373.1
TonB-dependent receptor; Identified by match to protein family HMM PF03544; match to protein family HMM TIGR01352.
  
   0.661
EEN81927.1
Identified by match to protein family HMM TIGR01352.
   
   0.573
infB
Translation initiation factor IF-2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily.
   
   0.573
EEN82942.1
TonB-linked outer membrane protein, SusC/RagA family; Identified by match to protein family HMM PF00593; match to protein family HMM PF07715.
  
  
  0.568
EEN82880.1
Hypothetical protein.
       0.561
EEN83202.1
TonB-dependent receptor plug domain protein; Identified by match to protein family HMM PF07715.
  
     0.546
EEN83796.1
TonB-linked outer membrane protein, SusC/RagA family; Identified by match to protein family HMM PF00593; match to protein family HMM PF07715.
  
    0.505
EEN82749.1
Hypothetical protein.
    
   0.501
EEN82316.1
Hypothetical protein.
  
     0.464
EEN83601.1
Identified by match to protein family HMM PF07980.
  
     0.452
Your Current Organism:
Porphyromonas endodontalis
NCBI taxonomy Id: 553175
Other names: P. endodontalis ATCC 35406, Porphyromonas endodontalis ATCC 35406, Porphyromonas endodontalis str. ATCC 35406, Porphyromonas endodontalis strain ATCC 35406
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.