STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEN82387.1Outer membrane protein transport protein, Ompp1/FadL/TodX family; Identified by match to protein family HMM PF03349. (554 aa)    
Predicted Functional Partners:
tpiA-2
Identified by match to protein family HMM PF07681.
  
     0.748
cdd
Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family.
       0.746
EEN82757.1
Tetratricopeptide repeat protein; Identified by match to protein family HMM PF00515; match to protein family HMM PF07719.
  
     0.739
EEN83021.1
Hypothetical protein.
  
     0.737
EEN82516.1
Hypothetical protein.
 
     0.724
EEN81900.1
Hypothetical protein.
  
     0.723
EEN82414.1
Hypothetical protein.
  
     0.717
EEN83681.1
Hypothetical protein.
  
     0.697
recO
Putative DNA repair protein RecO; Involved in DNA repair and RecF pathway recombination.
  
     0.682
EEN82026.1
Hypothetical protein.
  
     0.669
Your Current Organism:
Porphyromonas endodontalis
NCBI taxonomy Id: 553175
Other names: P. endodontalis ATCC 35406, Porphyromonas endodontalis ATCC 35406, Porphyromonas endodontalis str. ATCC 35406, Porphyromonas endodontalis strain ATCC 35406
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.