Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| EEB66091.1 | EEB66311.1 | CAPSP0001_1359 | CAPSP0001_0129 | Dinuclear metal center protein, YbgI family; Identified by match to protein family HMM PF01784; match to protein family HMM TIGR00486; Belongs to the GTP cyclohydrolase I type 2/NIF3 family. | TIM-barrel protein, nifR3 family; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family. | 0.463 |
| EEB66311.1 | EEB66091.1 | CAPSP0001_0129 | CAPSP0001_1359 | TIM-barrel protein, nifR3 family; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family. | Dinuclear metal center protein, YbgI family; Identified by match to protein family HMM PF01784; match to protein family HMM TIGR00486; Belongs to the GTP cyclohydrolase I type 2/NIF3 family. | 0.463 |
| EEB66311.1 | EEB66338.1 | CAPSP0001_0129 | CAPSP0001_0127 | TIM-barrel protein, nifR3 family; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family. | Cyclic nucleotide-binding domain protein; Identified by match to protein family HMM PF00027. | 0.509 |
| EEB66311.1 | EEB66339.1 | CAPSP0001_0129 | CAPSP0001_0126 | TIM-barrel protein, nifR3 family; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family. | Acetyltransferase, GNAT family; Identified by match to protein family HMM PF00583. | 0.457 |
| EEB66311.1 | EEB66786.1 | CAPSP0001_0129 | CAPSP0001_2106 | TIM-barrel protein, nifR3 family; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family. | Putative ribosomal RNA small subunit methyltransferase B; Identified by match to protein family HMM PF01189; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. | 0.427 |
| EEB66311.1 | guaA | CAPSP0001_0129 | CAPSP0001_1300 | TIM-barrel protein, nifR3 family; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family. | GMP synthase (glutamine-hydrolyzing) domain protein; Catalyzes the synthesis of GMP from XMP. | 0.514 |
| EEB66311.1 | panC | CAPSP0001_0129 | CAPSP0001_2200 | TIM-barrel protein, nifR3 family; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family. | Pantoate--beta-alanine ligase; Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate. Belongs to the pantothenate synthetase family. | 0.639 |
| EEB66311.1 | pheT | CAPSP0001_0129 | CAPSP0001_1204 | TIM-barrel protein, nifR3 family; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family. | phenylalanine--tRNA ligase, beta subunit; Identified by match to protein family HMM PF01588; match to protein family HMM PF03147; match to protein family HMM PF03483; match to protein family HMM PF03484; match to protein family HMM TIGR00472; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily. | 0.444 |
| EEB66311.1 | polA | CAPSP0001_0129 | CAPSP0001_2830 | TIM-barrel protein, nifR3 family; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family. | DNA-directed DNA polymerase; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.539 |
| EEB66311.1 | proS | CAPSP0001_0129 | CAPSP0001_2103 | TIM-barrel protein, nifR3 family; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family. | proline--tRNA ligase; Catalyzes the attachment of proline to tRNA(Pro) in a two- step reaction: proline is first activated by ATP to form Pro-AMP and then transferred to the acceptor end of tRNA(Pro). | 0.547 |
| EEB66311.1 | yocK | CAPSP0001_0129 | CAPSP0001_0128 | TIM-barrel protein, nifR3 family; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family. | Hypothetical protein. | 0.515 |
| EEB66338.1 | EEB66311.1 | CAPSP0001_0127 | CAPSP0001_0129 | Cyclic nucleotide-binding domain protein; Identified by match to protein family HMM PF00027. | TIM-barrel protein, nifR3 family; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family. | 0.509 |
| EEB66338.1 | EEB66339.1 | CAPSP0001_0127 | CAPSP0001_0126 | Cyclic nucleotide-binding domain protein; Identified by match to protein family HMM PF00027. | Acetyltransferase, GNAT family; Identified by match to protein family HMM PF00583. | 0.723 |
| EEB66338.1 | yocK | CAPSP0001_0127 | CAPSP0001_0128 | Cyclic nucleotide-binding domain protein; Identified by match to protein family HMM PF00027. | Hypothetical protein. | 0.786 |
| EEB66339.1 | EEB66311.1 | CAPSP0001_0126 | CAPSP0001_0129 | Acetyltransferase, GNAT family; Identified by match to protein family HMM PF00583. | TIM-barrel protein, nifR3 family; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family. | 0.457 |
| EEB66339.1 | EEB66338.1 | CAPSP0001_0126 | CAPSP0001_0127 | Acetyltransferase, GNAT family; Identified by match to protein family HMM PF00583. | Cyclic nucleotide-binding domain protein; Identified by match to protein family HMM PF00027. | 0.723 |
| EEB66339.1 | guaA | CAPSP0001_0126 | CAPSP0001_1300 | Acetyltransferase, GNAT family; Identified by match to protein family HMM PF00583. | GMP synthase (glutamine-hydrolyzing) domain protein; Catalyzes the synthesis of GMP from XMP. | 0.428 |
| EEB66339.1 | yocK | CAPSP0001_0126 | CAPSP0001_0128 | Acetyltransferase, GNAT family; Identified by match to protein family HMM PF00583. | Hypothetical protein. | 0.727 |
| EEB66786.1 | EEB66311.1 | CAPSP0001_2106 | CAPSP0001_0129 | Putative ribosomal RNA small subunit methyltransferase B; Identified by match to protein family HMM PF01189; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. | TIM-barrel protein, nifR3 family; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family. | 0.427 |
| EEB66786.1 | guaA | CAPSP0001_2106 | CAPSP0001_1300 | Putative ribosomal RNA small subunit methyltransferase B; Identified by match to protein family HMM PF01189; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. | GMP synthase (glutamine-hydrolyzing) domain protein; Catalyzes the synthesis of GMP from XMP. | 0.440 |
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