STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEB66416.1Putative gliding motility-associated lipoprotein GldB. (329 aa)    
Predicted Functional Partners:
GldJ
Gliding motility-associated lipoprotein GldJ; Identified by match to protein family HMM PF03781; match to protein family HMM TIGR03524.
  
   
 0.850
gldD
Gliding motility-associated lipoprotein GldD; Identified by match to protein family HMM TIGR03512.
  
   
 0.845
EEB64515.1
Tetratricopeptide repeat protein; Identified by match to protein family HMM PF00515.
  
   
 0.833
gldG
Gliding-associated putative ABC transporter substrate-binding component GldG; Identified by match to protein family HMM TIGR03521.
  
   
 0.825
sprA
Hypothetical protein; Identified by glimmer; putative.
  
   
 0.821
EEB66191.1
Hypothetical protein.
  
   
 0.806
gldL
Gliding motility-associated protein GldL; Identified by match to protein family HMM TIGR03513.
  
   
 0.796
gldK
Gliding motility-associated lipoprotein GldK; Identified by match to protein family HMM PF03781; match to protein family HMM TIGR03525.
  
   
 0.793
gldH
Gliding motility lipoprotein GldH; Identified by match to protein family HMM TIGR03511.
  
   
 0.790
EEB65419.1
Hypothetical protein.
  
     0.770
Your Current Organism:
Capnocytophaga sputigena
NCBI taxonomy Id: 553177
Other names: C. sputigena ATCC 33612, Capnocytophaga sputigena ATCC 33612, Capnocytophaga sputigena Capno, Capnocytophaga sputigena str. ATCC 33612, Capnocytophaga sputigena strain ATCC 33612
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