STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEB66313.1Glycosyltransferase, group 1 family protein; Identified by match to protein family HMM PF00534. (416 aa)    
Predicted Functional Partners:
EEB66358.1
Glycosyltransferase, group 2 family protein; Identified by match to protein family HMM PF00535.
    0.908
EEB66248.1
Putative dTDP-4-dehydrorhamnose 3,5-epimerase; Identified by match to protein family HMM PF00908.
  
  
 0.843
EEB66398.1
Glycosyltransferase, group 1 family protein; Overlaps another CDS with the same product name; identified by match to protein family HMM PF00534.
 
     0.843
EEB66343.1
Glycosyltransferase, group 2 family protein; Identified by match to protein family HMM PF00535.
 
    0.828
EEB66316.1
UDP-N-acetylglucosamine 2-epimerase; Identified by match to protein family HMM PF02350; match to protein family HMM TIGR00236.
  
  
 0.821
EEB66259.1
Polysaccharide biosynthesis protein; Identified by match to protein family HMM PF01943.
  
    0.820
EEB66260.1
Glycosyltransferase, group 2 family protein; Identified by match to protein family HMM PF00535.
 
    0.813
EEB66403.1
Glycosyltransferase, group 1 family protein; Overlaps another CDS with the same product name; identified by match to protein family HMM PF00534.
 
     0.813
EEB66367.1
NAD dependent epimerase/dehydratase family protein; Identified by match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF02719; match to protein family HMM PF05368; match to protein family HMM PF07993.
  
    0.796
EEB66362.1
Identified by match to protein family HMM PF01041; match to protein family HMM PF01053; match to protein family HMM PF01212; Belongs to the DegT/DnrJ/EryC1 family.
  
  
 0.788
Your Current Organism:
Capnocytophaga sputigena
NCBI taxonomy Id: 553177
Other names: C. sputigena ATCC 33612, Capnocytophaga sputigena ATCC 33612, Capnocytophaga sputigena Capno, Capnocytophaga sputigena str. ATCC 33612, Capnocytophaga sputigena strain ATCC 33612
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.