STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEB65285.1Hypothetical protein; Identified by glimmer; putative. (1643 aa)    
Predicted Functional Partners:
EEB64694.1
Identified by match to protein family HMM PF00691; match to protein family HMM PF07676.
  
   0.762
EEB64804.1
Identified by match to protein family HMM PF00691; match to protein family HMM PF07676.
  
   0.737
EEB64703.1
Peptidase S24-like protein; Identified by match to protein family HMM PF00717.
  
     0.605
EEB65281.1
Hypothetical protein; Identified by glimmer; putative.
 
 
   0.591
EEB66591.1
Hypothetical protein; Belongs to the peptidase S24 family.
  
     0.569
GldJ
Gliding motility-associated lipoprotein GldJ; Identified by match to protein family HMM PF03781; match to protein family HMM TIGR03524.
  
    0.501
EEB65101.1
Hypothetical protein.
  
 
   0.495
EEB65250.1
Hypothetical protein; Identified by glimmer; putative.
       0.493
EEB65266.1
Reprolysin (M12B) family zinc metalloprotease; Identified by match to protein family HMM PF01421.
 
 
   0.485
EEB65733.1
Outer membrane protein; Identified by match to protein family HMM PF03938.
  
   0.482
Your Current Organism:
Capnocytophaga sputigena
NCBI taxonomy Id: 553177
Other names: C. sputigena ATCC 33612, Capnocytophaga sputigena ATCC 33612, Capnocytophaga sputigena Capno, Capnocytophaga sputigena str. ATCC 33612, Capnocytophaga sputigena strain ATCC 33612
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.