STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ricIron-sulfur cluster repair di-iron protein; Di-iron-containing protein involved in the repair of iron- sulfur clusters; Belongs to the RIC family. (240 aa)    
Predicted Functional Partners:
EEB66148.1
Hypothetical protein.
 
    0.803
EEB66679.1
Transcriptional regulator, Rrf2 family; Identified by match to protein family HMM PF02082; match to protein family HMM TIGR00738.
 
  
 0.661
EEB64398.1
Identified by match to protein family HMM PF00034.
  
  
 0.655
nirK
Nitrite reductase, copper-dependent; Identified by match to protein family HMM PF00034; match to protein family HMM PF00394; match to protein family HMM PF07731; match to protein family HMM TIGR02376.
 
  
 0.566
EEB64462.1
2Fe-2S iron-sulfur cluster binding domain protein; Identified by match to protein family HMM PF00111; match to protein family HMM PF00175; match to protein family HMM PF00970.
  
  
 0.557
EEB65097.1
Hypothetical protein.
 
  
 0.508
Your Current Organism:
Capnocytophaga sputigena
NCBI taxonomy Id: 553177
Other names: C. sputigena ATCC 33612, Capnocytophaga sputigena ATCC 33612, Capnocytophaga sputigena Capno, Capnocytophaga sputigena str. ATCC 33612, Capnocytophaga sputigena strain ATCC 33612
Server load: medium (44%) [HD]