STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEB65541.1Hypothetical protein; 2.1.1.-. (59 aa)    
Predicted Functional Partners:
EEB65542.1
Hypothetical protein.
 
    0.847
EEB65578.1
Hypothetical protein; Identified by glimmer; putative.
       0.773
EEB65529.1
Hypothetical protein; Identified by glimmer; putative.
       0.542
EEB65561.1
Hypothetical protein; Identified by glimmer; putative.
       0.535
EEB65689.1
Identified by match to protein family HMM PF00881.
  
     0.520
mhqN_2
Identified by match to protein family HMM PF00881.
  
     0.495
EEB65658.1
CAAX amino terminal protease family protein; Identified by match to protein family HMM PF02517.
  
    0.472
EEB65762.1
Hypothetical protein.
  
     0.464
Your Current Organism:
Capnocytophaga sputigena
NCBI taxonomy Id: 553177
Other names: C. sputigena ATCC 33612, Capnocytophaga sputigena ATCC 33612, Capnocytophaga sputigena Capno, Capnocytophaga sputigena str. ATCC 33612, Capnocytophaga sputigena strain ATCC 33612
Server load: medium (42%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.