STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cdsAPhosphatidate cytidylyltransferase; Identified by match to protein family HMM PF01148; Belongs to the CDS family. (258 aa)    
Predicted Functional Partners:
EEB65562.1
CDP-alcohol phosphatidyltransferase; Identified by match to protein family HMM PF01066.
 
 
  0.991
EEB65700.1
Hypothetical protein.
  
 
  0.957
cdsA-2
Phosphatidate cytidylyltransferase; Identified by match to protein family HMM PF01148; Belongs to the CDS family.
  
  
 
0.924
EEB65236.1
Acyltransferase; Identified by match to protein family HMM PF01553.
  
 
  0.907
EEB66570.1
Putative CDP-diacylglycerol-serine O-phosphatidyltransferase; Identified by match to protein family HMM PF01066; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
    
  0.905
EEB64514.1
Prokaryotic diacylglycerol kinase; Identified by match to protein family HMM PF01219.
     
  0.900
EEB65526.1
Oxidoreductase, short chain dehydrogenase/reductase family protein; Identified by match to protein family HMM PF00106; match to protein family HMM PF01370; match to protein family HMM PF08659.
       0.732
EEB65530.1
Hypothetical protein; Identified by glimmer; putative.
       0.732
EEB65551.1
Hydrolase, alpha/beta domain protein; Identified by match to protein family HMM PF00561.
  
    0.604
EEB66120.1
Acyltransferase; Identified by match to protein family HMM PF01553.
  
 
  0.537
Your Current Organism:
Capnocytophaga sputigena
NCBI taxonomy Id: 553177
Other names: C. sputigena ATCC 33612, Capnocytophaga sputigena ATCC 33612, Capnocytophaga sputigena Capno, Capnocytophaga sputigena str. ATCC 33612, Capnocytophaga sputigena strain ATCC 33612
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.