STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEB65568.1Hypothetical protein. (551 aa)    
Predicted Functional Partners:
EEB65555.1
Efflux ABC transporter, permease protein; Identified by match to protein family HMM PF02687.
 
     0.908
EEB65521.1
ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.
 
     0.900
EEB65575.1
Efflux transporter, RND family, MFP subunit; Identified by match to protein family HMM PF00529; match to protein family HMM TIGR01730; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
       0.762
EEB66222.1
Hypothetical protein.
  
     0.548
EEB65586.1
Hypothetical protein.
  
     0.529
EEB64447.1
Hypothetical protein.
  
     0.520
EEB65572.1
Putative alpha-1,2-mannosidase; Identified by match to protein family HMM PF07971; match to protein family HMM TIGR01180.
       0.490
EEB67004.1
Hypothetical protein.
  
     0.456
EEB67009.1
Hypothetical protein.
  
     0.440
EEB66992.1
Hypothetical protein.
  
     0.409
Your Current Organism:
Capnocytophaga sputigena
NCBI taxonomy Id: 553177
Other names: C. sputigena ATCC 33612, Capnocytophaga sputigena ATCC 33612, Capnocytophaga sputigena Capno, Capnocytophaga sputigena str. ATCC 33612, Capnocytophaga sputigena strain ATCC 33612
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