STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEB66664.1Hypothetical protein. (461 aa)    
Predicted Functional Partners:
EEB66642.1
Identified by match to protein family HMM PF07494; match to protein family HMM PF07495.
 
     0.746
EEB66748.1
Identified by match to protein family HMM PF07980.
  
     0.733
EEB66710.1
Identified by match to protein family HMM PF07495.
  
     0.716
EEB66598.1
TonB-linked outer membrane protein, SusC/RagA family; Identified by match to protein family HMM PF00593; match to protein family HMM PF07715.
  
     0.664
EEB66752.1
Glycosyl hydrolase family 3 N-terminal domain protein; Identified by match to protein family HMM PF00933; match to protein family HMM PF01915; Belongs to the glycosyl hydrolase 3 family.
 
    0.623
EEB66629.1
Identified by match to protein family HMM PF07980.
 
     0.618
EEB65195.1
Identified by match to protein family HMM PF07980.
  
     0.613
EEB66674.1
Phospholipase/carboxylesterase; Identified by match to protein family HMM PF02230.
 
     0.595
EEB66742.1
TonB-linked outer membrane protein, SusC/RagA family; Identified by match to protein family HMM PF00593; match to protein family HMM PF07715.
 
     0.593
EEB66744.1
Hypothetical protein; Identified by glimmer; putative.
       0.572
Your Current Organism:
Capnocytophaga sputigena
NCBI taxonomy Id: 553177
Other names: C. sputigena ATCC 33612, Capnocytophaga sputigena ATCC 33612, Capnocytophaga sputigena Capno, Capnocytophaga sputigena str. ATCC 33612, Capnocytophaga sputigena strain ATCC 33612
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.